收稿日期: 2022-10-10
网络出版日期: 2023-08-03
基金资助
国家重点研发计划(2022YFC2504200);国家自然科学基金(82002878);北京大学口腔医院临床新技术新疗法项目(PKUSSNCT-22A14)
Application value of whole exon sequencing and immune related indicators in the precision treatment of oral squamous cell carcinoma
Received date: 2022-10-10
Online published: 2023-08-03
Supported by
the National Key Research and Development Program of China(2022YFC2504200);the National Natural Science Foundation of China(82002878);the Program for New Clinical Techniques and Therapies of Peking University Hospital of Stomatology(PKUSSNCT-22A14)
目的: 探索全外显子测序及相关指标在口腔鳞状细胞癌(oral squamous cell carcinoma,OSCC)个性化精准治疗中的意义和推广应用的可行性。方法: 选取2021年1月至2022年6月在北京大学口腔医院行OSCC根治手术并接受基因检测和免疫相关指标检测的患者,结合其临床病理特点,筛选潜在的靶向药物和免疫药物,以评估基因检测使患者受益的可能性。主要评估指标包括基因突变数量、联合阳性分数(combined positive score,CPS)、肿瘤突变负荷(tumor mutation burden,TMB)、微卫星序列状态和人类白细胞抗原B位点(human leukocyte antigen B,HLA-B)等。采用Excel进行统计学分析。结果: 共10例患者,排除1例腺样囊性癌,9例OSCC患者纳入本研究,其中男性6例,女性3例,平均年龄(55.44±9.59)岁。肿瘤位置:颊部5例,舌部3例,牙龈1例。基因检测结果发现,3例(33.3%)患者肿瘤组织内未发现基因突变,5例(55.6%)存在唯一的TP53基因突变,1例(11.1%)存在TP53和CHEK1突变,但暂无上市药物可用于这些突变基因的靶向治疗。遗传性肿瘤基因检测结果发现,所有患者中均未发现遗传肿瘤基因存在,提示OSCC为遗传性肿瘤的可能性较低。在免疫疗效相关标志物检测方面,CPS检测结果发现8例患者CPS≥1;TMB检测结果发现,TMB中位数为0.72 mutations/Mb(0~4.32 mutations/Mb),均较低;微卫星序列状态检测结果发现阴性及阳性对照结果均正确,提示所检测肿瘤组织均为微卫星稳定性;HLA-B检测结果发现仅有1例患者存在B62基因突变,提示OSCC组织标本中HLA-B的B44和B62相关基因型非常低。结论: 现有结果不支持基因检测和免疫相关指标检测在OSCC治疗中的广泛应用及推广。
谢尚 , 蔡志刚 , 单小峰 . 全外显子测序及相关指标在口腔鳞状细胞癌精准治疗中的应用价值[J]. 北京大学学报(医学版), 2023 , 55(4) : 697 -701 . DOI: 10.19723/j.issn.1671-167X.2023.04.021
Objective: To explore the significance and feasibility of whole exon sequencing and immune related indexes in personalized precision treatment of oral squamous cell carcinoma (OSCC). Methods: We retrospectively screened the patients who underwent surgery for oral cancer in Peking University Hospital of Stomatology and underwent genetic and immune biomarkers tests between January 2021 and June 2022. Combined with the clinicopathological characteristics of patients, potential targeted drugs and immunotherapy drugs were screened to evaluate the possibility of gene testing benefiting OSCC. The main evaluation indicators included the number of gene mutations, combined positive score (CPS), tumor mutation burden (TMB), microsatellite sequence status and human leukocyte antigen B (HLA-B) locus. Excel was used for statistical analysis. Results: A total of 10 patients were enrolled and 9 were included in this study, including 6 males and 3 females, with an average age of (55.44±9.59) years. The tumor location was buccal (5 cases), tongue (3 cases) and gingival (1 case). The results of genetic testing showed that 3 (33.3%) patients had no gene mutations in the tumor tissue, 5 (55.6%) patients had unique TP53 gene mutations, and 1 (11.1%) patient had TP53 and CHEK1 mutations. However, no drugs were available for targeted therapy of the mutated genes. The genetic tumor gene testing results showed that no genetic tumor gene was found in all the patients, suggesting that OSCC had a low possibi-lity of hereditary tumor. In terms of immune efficacy related markers, CPS test results showed that 8 patients had CPS≥1. TMB detection results showed that the median value of TMB value was 0.72 mutations/Mb, and the range was 0 to 4.32 mutations/Mb. The negative and positive control results of microsatellite sequence status were consistent, indicating that all the tumor tissues detected were microsatellite stability. The results of HLA-B detection showed that only one patient had B62 gene mutation, suggesting that the B44 and B62 related genotypes of HLA-B in OSCC tissue samples were low. Conclusion: The present results do not support the wide application and promotion of genetic testing and immune related indexes in OSCC.
| 1 | YangY,ZhouM,ZengX,et al.The burden of oral cancer in China, 1990-2017: An analysis for the Global Burden of Di-sease, Injuries, and Risk Factors Study 2017[J].BMC Oral Health,2021,21(1):44. |
| 2 | ZhengRS,ZhangSW,ZengHM,et al.Cancer incidence and mortality in China, 2016[J].J Natl Cancer Cent,2022,2(1):1-9. |
| 3 | ZhaoY,LiuL,WangY,et al.Efficacy and prognosis of chronic myeloid leukemia treated with imatinib mesylate in a Chinese po-pulation[J].Int J Hematol,2009,89(4):445-451. |
| 4 | DeiningerM,BuchdungerE,DrukerBJ.The development of imatinib as a therapeutic agent for chronic myeloid leukemia[J].Blood,2005,105(7):2640-2653. |
| 5 | AlbittarAA,AlhalabiO,GlitzaOliva IC.Immunotherapy for me-lanoma[J].Adv Exp Med Biol,2020,1244,51-68. |
| 6 | SuSC,LinCW,LiuYF,et al.Exome sequencing of oral squamous cell carcinoma reveals molecular subgroups and novel therapeutic opportunities[J].Theranostics,2017,7(5):1088-1099. |
| 7 | Al-HebshiNN,LiS,NasherAT,et al.Exome sequencing of oral squamous cell carcinoma in users of Arabian snuff reveals novel candidates for driver genes[J].Int J Cancer,2016,139(2):363-372. |
| 8 | BurtnessB,HarringtonKJ,GreilR,et al.Pembrolizumab alone or with chemotherapy versus cetuximab with chemotherapy for recurrent or metastatic squamous cell carcinoma of the head and neck (KEYNOTE-048): A randomised, open-label, phase 3 study[J].Lancet,2019,394(10212):1915-1928. |
| 9 | BensonAB,VenookAP,Al-HawaryMM,et al.NCCN guidelines insights: Colon cancer, Version 2.2018[J].J Natl Compr Canc Netw,2018,16(4):359-369. |
| 10 | ChowellD,MorrisLGT,GriggCM,et al.Patient HLA class Ⅰ genotype influences cancer response to checkpoint blockade immunotherapy[J].Science,2018,359(6375):582-587. |
| 11 | TannockIF,HickmanJA.Limits to personalized cancer medicine[J].N Engl J Med,2016,375(13):1289-1294. |
| 12 | PrasadV.Perspective: The precision-oncology illusion[J].Nature,2016,537(7619):S63. |
| 13 | 张帆,张晓菊,白春学.精准医学概念在肺癌靶向治疗中的应用[J].国际呼吸杂志,2016,36(11):848-853. |
| 14 | 中国抗癌协会国际医疗与交流分会,中国医师协会肿瘤医师分会乳腺癌学组.晚期乳腺癌基因检测热点问题中国专家共识(2021版)[J].中华肿瘤杂志,2022,44(1):60-67. |
| 15 | SargentDJ,MarsoniS,MongesG,et al.Defective mismatch repair as a predictive marker for lack of efficacy of fluorouracil-based adjuvant therapy in colon cancer[J].J Clin Oncol,2010,28(20):3219-3226. |
| 16 | AshazilaMJ,KannanTP,VenkateshRN,et al.Microsatellite instability and loss of heterozygosity in oral squamous cell carcinoma in Malaysian population[J].Oral Oncol,2011,47(5):358-364. |
| 17 | LinLH,ChouCH,ChengHW,et al.Precise identification of recurrent somatic mutations in oral cancer through whole-exome sequencing using multiple mutation calling pipelines[J].Front Oncol,2021,11,741626. |
| 18 | DevarakondaS,RotoloF,TsaoMS,et al.Tumor mutation burden as a biomarker in resected non-small-cell lung cancer[J].J Clin Oncol,2018,36(30):2995-3006. |
| 19 | KvistborgP,YewdellJW.Enhancing responses to cancer immunotherapy[J].Science,2018,359(6375):516-517. |
| 20 | DesiletsA,SoulieresD.Safety evaluation of pembrolizumab for treating recurrent head and neck squamous cell carcinoma[J].Expert Opin Drug Saf,2020,19(8):927-934. |
| 21 | XieS,ZhangXY,ShanXF,et al.Hyperion image analysis depicts a preliminary landscape of tumor immune microenvironment in OSCC with lymph node metastasis[J].J Immunol Res,2021,2021,9975423. |
| 22 | XieS,ShanXF,YauV,et al.Hyperion imaging system reveals heterogeneous tumor microenvironment of oral squamous cell carcinoma patients at T1N0M0 stage[J].Ann Transl Med,2020,8(22):1513. |
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