北京大学学报(医学版) ›› 2017, Vol. 49 ›› Issue (4): 580-584. doi: 10.3969/j.issn.1671-167X.2017.04.005

• 论著 • 上一篇    下一篇

结节性硬化症细胞株TSC2-/- MEFs和正常细胞株TSC2+/+ MEFs微小RNA表达谱的差异分析

蔡燚,郭浩,李汉忠,王文达,张玉石△   

  1. (中国医学科学院,北京协和医学院,北京协和医院泌尿外科, 北京100730)
  • 出版日期:2017-08-18 发布日期:2017-08-18
  • 通讯作者: 张玉石 E-mail:zhangyushi@126.com
  • 基金资助:
    国家自然科学基金(81670611)和协和中青年科研基金(IH1028800)资助

MicroRNA differential expression profile in tuberous sclerosis complex cell line TSC2-/- MEFs and normal cell line TSC2+/+ MEFs

CAI Yi, GUO Hao, LI Han-zhong, WANG Wen-da, ZHANG Yu-shi△   

  1. (Department of Urology, Peking Union Medical College Hospital, Chinese Academy of Medical Sciences and Peking Union Medical College, Beijing 100730, China)
  • Online:2017-08-18 Published:2017-08-18
  • Contact: ZHANG Yu-shi E-mail:zhangyushi@126.com
  • Supported by:
    Supported by the National Natural Science Foundation of China (81670611) and the Youth Science Foundation of PUMCH (IH1028800)

摘要: 目的:结节性硬化症是由于TSC1和TSC2基因突变导致累及多个器官、系统的常染色体显性遗传疾病,TSC2突变更为常见而且临床表型更为严重。为探讨结节性硬化症细胞株TSC2-/- MEFs与正常细胞株TSC2+/+ MEFs中微小RNA(microRNA,miRNA)表达谱的差异,以进一步研究相关miRNA在结节性硬化症发病机制中的作用奠定基础。方法:体外培养结节性硬化症细胞株TSC2-/- MEFs和正常细胞株TSC2+/+ MEFs,各选取3个样本分别作为实验组和对照组。用TRizol法提取细胞的总RNA,以紫外吸收测定法和变性琼脂糖凝胶电泳对RNA进行质量检测。采用miRNA芯片筛选两者之间差异表达的miRNA,样品间表达变化标准以上调至原2倍或下调至原1/2作为阈值范围,并以实时定量PCR验证miRNA芯片结果的可靠性。CCK-8法测定细胞增殖活性。 结果:在结节性硬化症细胞株TSC2-/- MEFs中,上调≥原2倍差异表达的miRNA分子有14个,下调≤原1/2差异表达的miRNA分子有26个。miRNA-199a-5p在TSC2-/- MEFs显著低表达,过表达miRNA-199a-5p可显著抑制TSC2-/- MEFs细胞增殖。结论:结节性硬化症细胞株TSC2-/- MEFs和正常细胞株TSC2+/+ MEFs存在差异表达miRNA分子。miRNA-199a-5p参与结节性硬化症的发生、发展,可能是防治结节性硬化症的重要分子靶点。

关键词: 结节性硬化症, 细胞系, 微RNAs, 细胞增殖

Abstract: Objective: Tuberous sclerosis complex (TSC) is a multisystem genetic disorder caused by mutations in the TSC1 and TSC2 genes, but the molecular events contributing to TSC are not well understood. However, little is known about the role of microRNAs in TSC. To explore the microRNA differential expression profile between tuberous sclerosis complex cell line TSC2-/- MEFs and normal type cell line TSC2+/+ MEFs, and to provide new clues to study the mechanism of microRNA function in tuberous sclerosis complex. Methods: TSC2-/- MEFs and TSC2+/+ MEFs cell lines were cultured in vitro, each with three samples chosen as the experimental group and the control group respectively. Total RNA was isolated using TRizol and purified with RNeasy mini kit according to manufacturer’s instructions. RNA quality and quantity were measured by using nanodrop spectrophotometer and RNA integrity was determined by gel electrophoresis. Total RNAs were extracted by TRizol, followed by RNA quantification and quality control. MicroRNA profiles were analyzed by microarray and the threshold value used to screen up-regulated more than 2-fold change or down-regulated less than 0.5-fold change compared with controls. Real-time PCR was used to validate the reliability of microarray. Cell counting kit-8 (CCK-8) assay was performed to evaluate the proliferation. Results: Fourteen microRNAs, including miR-18a-5p, miR-376c-3p, miR-136-5p, miR-467c-5p, miR-467b-5p, miR-5104, miR-3098-3p, miR-30a-3p, miR-302b-3p, miR-18a-3p, miR-19b-1-5p, miR-19a-5p, miR-20a-5p, miR-155-5p, were up-regulated, while twenty-six microRNAs, including miR-200b-3p, miR-450a-1-3p, miR-542-5p, miR-199b-5p, miR-10a-5p, miR-466c-5p, miR-450a-5p, miR-450b-5p, miR-542-3p, miR-351-5p, miR-322-3p, miR-199a-3p, miR-335-5p, miR-10b-5p, miR-351-3p, miR-155-3p, miR-497a-5p, miR-503-5p, miR-148a-3p, miR-1843a-5p, miR-199a-5p, miR-490-5p, miR-450a-2-3p, miR-322-5p, miR-214-3p, miR-450b-3p, were downregulated in tuberous sclerosis complex cell line TSC2-/- MEFs compared with normal type cell line TSC2+/+ MEFs (P<0.05). Real-time PCR confirmed the expressions of miR-136-5p, miR-30a-3p, miR-302b-3p, miR-10b-5p, miR-148a-3p, miR-199a-5p consistent with the microarray data (P<0.05). Furthermore, the overexpression of miR-199a-5p significantly inhibited cell proliferation (P<0.05). Conclusion: There are differences in the expression of miRNA between the tube-rous sclerosis complex cell line TSC2-/- MEFs and normal cell line TSC2+/+ MEFs. MiRNA-199a-5p plays an important role in tuberous sclerosis complex, which may be developed as an important molecular target for the treatment of tuberous sclerosis complex.

Key words: Tuberous sclerosis, Cell line, MicroRNAs, Cell proliferation

中图分类号: 

  •  
[1] 王晓,贺丹,李文婷,阿迪拉·斯依提,韩蕊,董颖. 144例维吾尔族与汉族女性子宫内膜癌微小RNA表达特点及临床意义[J]. 北京大学学报(医学版), 2020, 52(3): 570-577.
[2] 谢静,赵玉鸣,饶南荃,汪晓彤,方滕姣子,李晓霞,翟越,李静芝,葛立宏,王媛媛. 3种口腔颌面部来源的间充质干细胞成血管内皮分化潜能的比较研究[J]. 北京大学学报(医学版), 2019, 51(5): 900-906.
[3] 张静,李素芳,陈红,宋俊贤. miR-106b-5p在调节内皮细胞基因表达谱中的作用[J]. 北京大学学报(医学版), 2019, 51(2): 221-227.
[4] 王子成,程立,吕同德,苏黎,林健,周利群. 炎症因子预处理的脂肪干细胞可明显抑制外周血单个核细胞增殖[J]. 北京大学学报(医学版), 2018, 50(4): 590-594.
[5] 唐旭,赵卫红,宋琴琴,殷华奇,杜依青,盛正祚,王强,张晓威,李清,刘士军,徐涛. SOX10对前列腺癌细胞增殖及侵袭的影响[J]. 北京大学学报(医学版), 2018, 50(4): 602-606.
[6] 康磊,霍焱,王荣福,张春丽,闫平,徐小洁. MicroRNA-155靶向的放射性标记探针对乳腺癌小鼠模型的活体显像[J]. 北京大学学报(医学版), 2018, 50(2): 326-330.
[7] 陈玮, 胡凡磊, 刘洪江, 徐丽玲, 李英妮, 栗占国. 类风湿关节炎患者髓系来源的抑制细胞促进自身B细胞增殖[J]. 北京大学学报(医学版), 2017, 49(5): 819-823.
[8] 杨迪,许珺辉,邓芙蓉,郭新彪. 纳米银对皮肤细胞半通道活性的影响及其在细胞增殖抑制中的作用[J]. 北京大学学报(医学版), 2017, 49(3): 371-375.
[9] 高翔,陈香梅,张婷,张静,陈茉,郭正阳,石岩岩,鲁凤民,丁士刚. 巨噬细胞加帽蛋白与胃癌细胞增殖及迁移能力的关系[J]. 北京大学学报(医学版), 2017, 49(3): 489-494.
[10] 司马梓涵,洪瑛瑛,李铁军. PTCH1基因突变对牙源性角化囊性瘤上皮细胞增殖的影响[J]. 北京大学学报(医学版), 2017, 49(3): 522-526.
[11] 隋华欣, 吕培军, 王宇光, 王勇, 孙玉春. 低能量激光照射对人脂肪基质细胞增殖分化的影响[J]. 北京大学学报(医学版), 2017, 49(2): 337-343.
[12] 李静文,殷晓晖,栾庆先. 不同代次诱导多能干细胞增殖及牙周定向分化的能力[J]. 北京大学学报(医学版), 2017, 49(1): 16-024.
[13] 胡佳,邹晓英,庄姮,高学军. 根管封闭剂对牙周膜细胞生物相容性的影响[J]. 北京大学学报(医学版), 2016, 48(5): 871-877.
[14] 凌龙,赵玉鸣,葛立宏. 不同炎症状态下犬年轻恒牙牙髓干细胞增殖及成骨分化能力的改变[J]. 北京大学学报(医学版), 2016, 48(5): 878-883.
[15] 贾凌飞,甘业华,俞光岩. MicroRNA表达与舌鳞癌患者预后的关系及其调控舌鳞癌生物学行为的机制[J]. 北京大学学报(医学版), 2016, 48(1): 5-9.
Viewed
Full text


Abstract

Cited

  Shared   
  Discussed   
[1] 万有, , 韩济生, John E. Pintar. 孤啡肽基因敲除小鼠电针镇痛作用增强[J]. 北京大学学报(医学版), 2009, 41(3): 376 -379 .
[2] 张燕, 韩志慧, 钟延丰, 王盛兰, 李玲玲, 郑丹枫. 骨骼肌活组织检查病理诊断技术的改进及应用[J]. 北京大学学报(医学版), 2009, 41(4): 459 -462 .
[3] 赵奇, 薛世华, 刘志勇, 吴凌云. 同向施压测定自酸蚀与全酸蚀粘接系统粘接强度[J]. 北京大学学报(医学版), 2010, 42(1): 82 -84 .
[4] 林红, 王玉凤, 吴野平. 学校生活技能教育对小学三年级学生行为问题影响的对照研究[J]. 北京大学学报(医学版), 2007, 39(3): 319 -322 .
[5] 丰雷, 程嘉, 王玉凤. 注意缺陷多动障碍儿童的运动协调功能[J]. 北京大学学报(医学版), 2007, 39(3): 333 -336 .
[6] 李岳玲, 钱秋瑾, 王玉凤. 儿童注意缺陷多动障碍成人期预后及其预测因素[J]. 北京大学学报(医学版), 2007, 39(3): 337 -340 .
[7] . 书讯[J]. 北京大学学报(医学版), 2007, 39(3): 225 -328 .
[8] 张宏文, 丁洁, 王芳, 杨惠霞. 一例X连锁Alport综合征女性妊娠期随访[J]. 北京大学学报(医学版), 2007, 39(4): 351 -354 .
[9] 韩金涛, 赵军, 栾景源, 张龙. 多发结核性腹主动脉瘤一例[J]. 北京大学学报(医学版), 2007, 39(4): 361 -364 .
[10] 燕太强, 杨荣利, 郭卫, 沈丹华. 胫骨平滑肌肉瘤伴全身多发骨转移一例[J]. 北京大学学报(医学版), 2007, 39(4): 369 -373 .